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the total microglial cell size, cell body size and size   In conclusion, the method for analyzing microglial
           of  the  dendritic  processes  separately,  the  specific   morphological changes as marker for microglial
           characteristics of the morphological changes can be   activation by semi-automatic image analysis of IBA-1
           investigated. In our experiment for instance, it became   stained brain sections, described in this article, provides
           apparent that  (without significantly changing the   a novel sensitive marker for microglial activation in
           number of microglia or cell size) there is a reduction of   rats, which is quick and easy to perform and provides
           the size of the dendritic processes. Surgery, on the other   additional information about the morphological
           hand, led to increased cell body size, specifically in   characteristics of microglia. Although conclusions
           the aged rats. Accordingly, a dystrophic deramificated   about microglial activation based on morphological
           morphology of microglia has been observed in old rats   characteristics alone should be drawn with great
           and humans, [6,28]  whereas surgery was associated with   caution, this novel analysis method could, combined
           a more classical microglial activation. [20,29]    with other markers related to microglial activation,
                                                              contribute to research in the field of neuroimmunology.
           The method proposed in this article has several
           limitations. Firstly, in this study we validated our   ACKNOWLEDGMENTS
           method on relatively small areas (0.06 mm ) in order
                                                 2
           to compare it to microglial activation based on visual   We acknowledge funding from the University of Groningen
           characterization in those same areas. Therefore, only   as this research was part of the Rosalind Franklin Fellowship
           approximately 13 microglia/area were analyzed.     awarded to Dr. van Leeuwen. We thank Jan Keijser, Wanda
           However,  we  successfully  explored  the  method  on   Douwenga and Folkert Postema for their technical support
           substantially larger areas (data not shown), further   and Kèvin Knoops for his assistance with implementing the
           confirming its benefits.                           image analysis method for Image J. We thank Prof. EA van
                                                              der Zee, chair of the Department of Molecular neurobiology
                                                              of the University of Groningen, and Prof. E Heineman, chair
           Second, although we aim for an objective marker    of  the  Department  of  Surgery  of  the  University  Medical
           for microglial activation, the staining threshold and   Center Groningen for the use of their facilities and general
           size filter have to be subjectively determined by   and material support.
           researchers based on the staining intensity of the
           dendritic processes and cell bodies. A possible solution   REFERENCES
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