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Page 4 of 11                                             Nguyen et al. J Transl Genet Genom 2018;2:19  I  http://dx.doi.org/10.20517/jtgg.2018.20

               Table 2. Administration of drugs in xenografted mice
                Drug                      Dose             Mode of administration  Frequency of administration
                Epirubicin              1 mg/kg             Intra-peritoneal          Once a week
                Cyclophosphamide        30 mg/kg            Intra-peritoneal          Twice a week
                Bevacizumab             5 mg/kg             Intra-peritoneal          Three times a week
                Paclitaxel              20 mg/kg            Intra-peritoneal          Twice a week
                Docetaxel               15 mg/kg            Intra-peritoneal          Twice a week
                Cetuximab               10 mg/kg            Intra-peritoneal          Twice a week
                Cisplatin               3 mg/kg             Intra-peritoneal          Once a week
                Oxaliplatin             1 mg/kg             Intra-peritoneal          Twice a week
                Gemcitabine             400 mg/kg           Intra-peritoneal          Once a week
                Capecitabine            400 mg/kg           Gavage                    Once a week
                Everolimus              5 mg/kg             Gavage                    Twice a week
                Sunitinib               40 mg/kg            Gavage                    Once a week

               Briefly, partial metabolic response (PMR) is defined as a reduction in maximum standard uptake value
               (SUV ) of at least 30%, with no new lesions. Complete metabolic response (CMR) corresponds to the
                    max
               disappearance of all lesions in the blood-pool background. Progressive metabolic disease (PMD) is defined
               by an increase in SUV  greater than 30%, or the appearance of new fluoro-deoxyglucose (FDG)-avid lesions.
                                 max
               Stable metabolic disease applies when the criteria for the other categories (CMR, PMR or PMD) are not met.

               18 FDG (5 MBq/kg; not exceeding 500 MBq) was injected intravenously 60 min before data were acquired
               on a Philips gemini XL PET/computed tomography (CT) scanner. CT data were acquired first (120 kV; 100
               mAs; no contrast-enhancement). PET 3D data were acquired with 2 min per bed position, and images were
               reconstructed using a 3D row-action maximum likelihood algorithm.

                                                                                                     18
               PET/CT images were interpreted by a nuclear medicine physician blinded to the patient’s record.  FDG
               uptake was expressed as the SUV. A 3D region of interest (ROI) was drawn around the lesions and SUV
                                                                                                        max
               (maximum SUV value within the ROI) was measured. SUV  of the lesions with the highest uptake were
                                                                  max
               recorded and used for the study analysis (five target lesions were assessed). The SUV  of the liver was also
                                                                                      max
               recorded as a control value. The change in SUV  at each evaluation was expressed as ΔSUV  (%) = 100 ×
                                                                                              max
                                                       max
               (cycle n SUV  - cycle (n - 1) SUV )/cycle (n - 1) SUV . The appearance of new lesions was also recorded.
                          max               max              max
               For each line of chemotherapy, time-to-progression (TTP) was defined as the time between the initiation of
               treatment and the diagnosis of disease progression.


               Assessment of tumor response in xenografts
               To assess tumor response in xenografts, ultrasonography was performed twice a week on treated and
               untreated mice using an AplioXT ultrasonograph (Toshiba, Japan). Tumor growth was measured in two
               diameters, and tumor volumes were calculated as V = L × Ɩ  ÷ 2. For each drug or drug combination, a
                                                                   2
               growth curve was established.

               The coefficient of inhibition for a drug or a drug combination was calculated as (a’- a)/a, a being the slope
               of the curve before the start of treatment (day 0), and a’ the slope of the curve between day 0 and day 28 of
               treatment [Figure 1].


               Statistical analysis
               For the correlation studies, the Kendall rank correlation coefficient R  was calculated between patient
                                                                             2
               ΔSUV  for a given chemotherapy regimen and the coefficient of inhibition for the same regimen in the
                     max
               TNBC xenograft. A P value under 0.05 was considered to be significant.
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