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sensors ) and it should have a high-throughput potential.  of the matrix should be adjusted to those in the location of
                  [54]
                                                               growth and metastatic dissemination of the tumor under
            To  understand  the  causes  and  consequences  during   investigation. In this context, Fernandez-Fuente  et al.
                                                                                                            [60]
            pathophysiological progression from a primary neoplastic   investigated the impact of different environmental conditions
            lesion in the brain towards a metastatic cancer and to pre-  on glioblastoma stem cells (GSCs). They found that GSCs
            clinically  test  potential  intervention  strategies,  we thus
            require model systems that mimic not only the proteomic   grown in collagen-based 3D conditions were markedly less
            heterogeneity of the tumor cell itself but also the reciprocal   susceptible to receptor tyrosine kinase inhibition by currently
            interactions  between the tumor and the receiving brain   available inhibitors, suggesting that oncogene addiction of
            tissue [Figure  2].  The  following  paragraph  provides an   tumor cells could also be bypassed by adhesion signaling. [61]
            overview over some recent  approaches in primary brain   Interestingly, matrix stiffness or the addition of hyaluronic
            tumor  research.  It  highlights  the  difficulty  to  design  an   acid (HA) did not affect the sensitivity of the GSCs in this
            optimal, tumor-adapted system and emphasizes the need to   study. Primary cells from glioma patient tumor material
            further improve currently used systems.            exposed to increasing concentrations of HA responded with
                                                               rounded morphology and reduced migration, suggesting
            2D and 3D model systems  in primary brain          that HA concentrations may affect glioma cell behavior.
                                                                                                            [62]
            tumor research                                     Consistently, addition of HA to porous chitosan scaffolds [63]  or
            A number of articles have been published in the last few years   to artificial hydrogels  increased the expression of stem cell
                                                                               [64]
            that used in vitro model systems to evaluate effects of novel   markers and VEGF and HIF-1, respectively. However, the
            potential treatment strategies on growth, viability or motile   finding that increasing matrix stiffness - by adding agarose to
            behavior of primary brain tumors [Table 1]. A general consensus   a collagen I matrix - blocks glioma invasiveness,  suggested
                                                                                                    [19]
            has been reached in that 3D cell culture model systems reflect   that stiffness alone and independent of ligand binding acted
            the specifics of the in vivo situation better compared to 2D   as a critical determinant for primary brain tumor cell function.
            model systems. On the down side of this was the lack of   An improved in vitro environment for brain tumor research
            high-throughput capability of 3D methods that hampered   would consist of neuronal and brain-resident interstitial
            until a few years ago their broader use in combination with   cells  that  secrete  the  brain-specific  ECM  components  into
            in screening approaches. A milestone in this context was the   which the brain tumor cells can then be implanted. Such
            generation of spheroid cultures in 96 or even 384 well format   an environment was established from brain tissue extracts
            from primary brain tumors that allowed the parallel testing or   on  micro  filters  (Hi-spots)  on  which  GBM  cell  sensitivity
            large sample sizes. [54-56]  In these studies, diagnostic dyes and   to anti-proliferative compounds was tested. [65]  Despite its
            fluorescent proteins were used individually or in combination   high-throughput potential, a setback of this method is the
            for probing cellular functions on the one hand and for   lack of control over the cellular composition in the Hi-spots
            discriminating specific cell populations on the other hand. A   and the absence of brain-specific architectural organization.
            general protocol describing the reproducible establishment   A while ago, a simple but intriguing co-culture model of
            and microscopy-based analysis of spheroid cultures using   medulloblastoma and leptomeningeal cells was published,
            fluorescent  protein  quantification  in  high  throughput  was   and it indicated paracrine, growth-promoting effects of
            described recently.  As an alternative to fluorometric read-  latter that might be instrumental for studying the notoriously
                          [57]
            outs, electrochemical impedance spectroscopy was used to   difficult to grow primary tumor cells in vitro.  The ideal
                                                                                                    [66]
            quantify different susceptibilities of 2D versus 3D spheroid   “organotypic environment” for primary brain tumor research
            culture of glioblastoma and neuroblastoma cell lines to   was already in development in the early seventies of the last
            cytotoxic compounds  and to determine the therapeutic   century, when the organotypic brain slice culture (OBSC)
                             [58]
            window of these compounds. Using different combination of   technology was established.  The advantages of OBSCs are
                                                                                    [67]
            dyes to separate subpopulation of cells grown in co-culture   that micro environmental parameters and a relatively correct
            combined  with  diagnostic  flow  cytometry  and  two-photon   architectural organization are maintained that mimic the in
            microscopy allowed to further refine the selective output of   vivo situation (see below).
            3D methods.  However, high-throughput capabilities and
                      [54]
            accuracy of a selected read-out has to be carefully balanced   Increasing complexity: system impact and single
            and discriminating phenotypic differences at single cell   cell behavior
            level in 3D cultures in high throughput remains a formidable   Neither are tumor functions disconnected from other tissues
            challenge.                                         and the organs nor can the impact of tissues or organs on drug
                                                               efficacy in the targeted tumor be predicted. An interesting
            The impact  of the embedding matrix  on the        approach to evaluate  the effect of metabolic  activity  on
            behavior of the tumor cell                         cytotoxicity of compounds and chemotherapeutics in vitro
            The choice of the embedding matrix is of outmost   was tested by Ma and colleagues using a 3D micro-tissue
            importance for 3D cultures, in particularly for primary brain   perfusion system.  TMZ and IFO were perfused through
                                                                             [68]
            tumors that encounter in vivo mostly brain parenchyma and   hepatocytes before exposure to GBM  cells and a clear
            collagen-rich surfaces and structures in the subarachnoid   impact  of hepatocyte-provided  cytochrome  P450 on IFO
            space. [23,24,59]  Hence, the biophysical and chemical properties   activation could be shown. Analogous experimental follow-


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