Page 61 - Read Online
P. 61

Page 4 of 11                      Narayanan et al. J Cancer Metastasis Treat 2019;5:36  I  http://dx.doi.org/10.20517/2394-4722.2018.77

               confocal laser-scanning microscope (Olympus) was used for IF IH-stained slides and the images were
               processed with CellSens Dimension 1.11 software using the 2D deconvolution algorithm (Olympus).


               NanoString mRNA expression analysis
               Six snap-frozen LMCA tissue samples from the original cohort of 16 patients included for DAB IHC staining
               were used to isolate total RNA. RNA was extracted using the MagJET RNA Kit and KingFisher Duo
               (ThermoFisher Scientific) protocol and quantitated by the NanoDrop 2000 Spectrophotometer (Thermo
               Scientific) and Qubit (Thermo Scientific). mRNA was assayed by New Zealand Genomics Ltd (Dunedin,
               NZ), using the NanoString nCounter Gene Expression Assay (NanoString Technologies, Seattle, WA, USA).
               Probes for the genes were designed and synthesized by NanoString Technologies and are PRR (ATP6AP2,
               NM_005765.2), ACE (CD143, NM-000789.2), ATIIR1 (AGTR1, NM_000685.3), and ATIIR2 (AGTR2,
               NM_000686.3). Raw data were analyzed by nSolver software (NanoString Technologies) using standard
               settings and were normalized against the housekeeping gene glyceraldehyde 3-phosphate dehydrogenase
               (GAPDH), as routinely performed in our laboratory [16,28] .

               Western blotting
               Total protein was extracted from three snap-frozen LMCA tissue samples from the original cohort of 16
               patients used for DAB IHC staining, resolved by SDS-PAGE, and transferred to a PVDF membrane as
                                 [31]
               previously described , and probed using the following antibodies: PRR (1:500, cat# ab40790, Abcam),
               ATIIR1 (1:500; cat# sc-1173, Santa Cruz, CA, USA), ATIIR2 (1:1000; cat# ab92445, Abcam), ACE (1:200; cat#
               sc-12184, Santa Cruz), and β-actin (1:500; cat# ab8229, Abcam). Secondary and tertiary antibodies were goat
                                                                                                  TM
               anti-rabbit HRP (1:2000; cat# ab6721, Abcam) for PRR and ATIIR1, rabbit anti-goat Superclonal  biotin
                                                                                   TM
               conjugate (1:5000; cat# A27013, Thermo Fisher) and goat anti-rabbit Superclonal  biotin conjugate (1:5000;
                                                          TM
               cat# A27035, Thermo Fisher) followed by Pierce  Streptavidin Poly-HRP (1:5000, cat# 21140, Thermo
               Fisher) for ACE and ATIIR2, respectively, and chicken anti-goat Alexa Fluor 647 (1:2000; cat# A21244, Life
               Technologies) for β-actin. Clarity Western ECL (cat# 1705061, Bio-Rad) was used as the substrate for HRP
               bands and the Chemi Doc MP Imaging System (Bio-Rad) and ImageLab 5.0 software (Bio-Rad) were used
               for detection and analysis, as previously used [16,28] . Positive controls were snap-frozen human placenta tissue
               for PRR and ATIIR1, snap-frozen mouse lung tissue for ACE, and a recombinant ATIIR2 protein (cat#
               H00000186-P01, Novus Biologicals) for ATIIR2. Matched mouse (1:500; cat# ab18443, Abcam) and rabbit
               (1:500; cat# ab171870, Abcam) isotype controls were used as appropriate negative controls.


               Statistical analysis
               Statistical analysis of the NanoString mRNA data was performed using t test (SPSS v 24).



               RESULTS
               Histology and DAB IHC staining
               H&E staining confirmed the presence of LMCA on the slides for each of the 16 tissue samples. DAB IHC
               staining demonstrated the expression of PRR [Figure 1A, brown] which was localized to cells within the
               TNs, cells within the PTS and the endothelium of the microvessels within the PTS. ACE [Figure 1B, brown]
               was expressed on the luminal surface of the TNs and weakly on the endothelium of the microvessels within
               the PTS. Strong cytoplasmic expression of ATIIR1 [Figure 1C, brown] was present on the cells within the
               TNs, the cells within the PTS and the endothelium of the microvessels within the PTS. ATIIR2 [Figure 1D,
               brown] was also expressed by the cells within the TNs, and weakly on the endothelium of the microvessels
               within the PTS.

               The expected expression patterns of positive controls for PRR [Supplementary Figure 1A, brown],
               ACE [Supplementary Figure 1B, brown], ATIIR1 [Supplementary Figure 1C, brown], and ATIIR2
               [Supplementary Figure 1D, brown] were demonstrated in human placenta, kidney, liver and kidney,
   56   57   58   59   60   61   62   63   64   65   66