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Sane et al. Microbiome Res Rep 2023;2:18  https://dx.doi.org/10.20517/mrr.2023.12  Page 5 of 12





































                Figure 1. Development of OA according to Lpps administration. Representative images of macroscopic degradation. (A) and of H&E-
                stained joints; (B) of left knee (no injection), right MIA-injected joint from untreated and Lpps treated rat; (C) significant lower
                prevalence of OA in Lpps treated group (Fisher’s exact test; P < 0.008); (D) rat discrimination by bacteria profiling according to OA
                using PSL-R analysis. BC: treated rats; W: water-drinking rats; dark circle: OA rats; grey circle: healthy rats.


               Rats responsive to Lpps treatment are clustered apart from the OA rats
               PLS-R analysis of weight, APC numbers and bacterial counts data shows clustering by rat group according
               to OA development [Figure 1D]. Plots corresponding to the two unresponsive Lpps rats are localized
               between the water drinking group prone to OA development and the responsive Lpps group suggesting that
               an optimal balance between the selected variables is associated with the protection.


               Principal component analysis of the data from the whole group draws attention to two bacteria strongly
               associated with the protective effect, i.e., Bacteroides thetaiotaomicron and the butyrate-producing
               Eubacterium plexicaudatum [Figure 2]. Ligilactobacillus murinus in the distal ileum contributed to the Lpps
               effect as well as Lactobacillus johnsonii localized in the caecum and colon. Additionally, Parabacteroides
               goldsteinii colonizing the lower part of the digestive tract is associated with OA progression.


               Moreover,  PCA  of  data  excluding  the  two  unresponsive  Lpps-treated  rats  linked  as  well
               B. thetaoiotaomicron, E. plexicaudatum and P. goldsteinii to the regulation of OA onset. OA progression was
               not related to weight. The number of APC (+) in bone marrow does not either contribute to OA onset.


               A few bacteria are targeted by Lpps intake
               To further investigate Lpps effect on the selected bacteria, counts were compared according to the diet and
               OA development using ANOVA and Bonferroni post-hoc test [Table 1 and Supplementary Table 2]. In the
               whole group (i.e., 10 control rats and 10 Lpps-treated rats), L. murinus and enterococci showed significant
               expansion in the distal ileum of the Lpps-protected rats. On the contrary, rats developing OA exhibited
               higher counts of Akkermansia sp. in the colon.
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