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Page 4 of 14                 Zoghi et al. Neuroimmunol Neuroinflammation 2019;6:14  I  http://dx.doi.org/10.20517/2347-8659.2019.03

               Table 2. Group allocation of each participant and time of each assessment post injury
               Participant  Group WBT or UBT Date of injury  Level of injury  First Ax WPI  Second Ax WPI Third Ax WPI  Fourth Ax WPI
               P1             WBT        06/2009   D Incomplete  91         107         120        147
               P2             WBT        03/2009   B Incomplete  152        167         NA         NA
               P3             WBT        04/2002   D Incomplete  527        543         553        NA
               P4             WBT        07/2010   A Complete    83         113         124        NA
               P5             UBT        10/2009   D Incomplete  93         108         122        148
               P6             WBT        12/1960   D Incomplete  2641       2657        2673       2697
               P7             UBT        08/2010   D Incomplete  91         107         118        NA
               P8             WBT        06/2006   A Complete    243        262         273        300
               P9             WBT        05/2001   A Complete    592        605         NA         NA
               P10            UBT        11/2002   A Complete    511        525         NA         NA
               P11            WBT         04/2006  A Complete    320        337         346        NA
               P12            UBT         12/2008  A Complete    115        133         146        172
               P13            UBT         08/2010  A Complete    109        122         NA         NA
               P14            UBT         06/2011  B Incomplete  6          22          41         61
               P15            WBT         03/1999  C Incomplete  647        663         678        703
               P16            WBT         10/2001  A Complete    554        570         580        NA
               P17            WBT         08/2003  A Complete    418        433         NA         NA
               P18            WBT         09/1992/  A Complete   961        979         991        1019
               WBT: whole body training; UBT: upper body training; WPI: weeks post injury; NA: not assessed; Ax: assessment; P: participant

               RT300 cycle (Restorative Therapies, Baltimore, MD, USA). Surface electrodes were attached on quadriceps,
               gluteal and hamstrings muscles. The parameters of the FES were: pedal cadence, 5-50 rev/min; stimulus
                                                                                                [24]
               intensity, maximum 140 mA; pulse width, 0.3 ms; frequency, 35 Hz; and duration, up to 30 min .

               Participants in the upper body exercise group (n = 6, 3 AIS A complete and 3 AIS B-D incomplete) received
               an upper body strength and fitness program three times per week for 12 weeks. This upper body training
               program included a circuit-based exercise program incorporating resistance and cardiorespiratory training.
               None of the participants had participated in an intensive exercise program during the three-week period
               before starting this trial.

               The participants with SCI were assessed up to four times over a period of one year. The assessment sessions
               are reported based on the number of weeks post-SCI [Table 2].

               The following assessments were performed on participants in both groups before training (baseline), after
               12 weeks of training and 6 months and 12 months post-recruitment.

               Lower limb BMCA
               The lower limb BMCA protocol was performed with participants lying supine. The protocol included:
               voluntary tasks, tendon-tap responses and vibration responses. The sEMG of 14 muscles (seven muscles
                                                                                        [21]
               from each lower limb and trunk) were recorded continuously throughout the protocol  with self-adhesive
               pre-gelled disposable surface electrodes (Noraxon Dual electrodes, Scottsdale AZ, USA). The muscles
               were lumbar paraspinal muscles, rectus abdominis, quadriceps, adductors, tibialis anterior, hamstring and
               gastrocnemius. EMG signals were amplified (1000 ×) by ZeroWire electrodes (Cometa, Milan, Italy) and
               then filtered (20-500 Hz) and digitised online (1 kHz sampling rate) using a PowerLab recording system
               (ADInstruments Ltd).

               Two bilateral voluntary tasks (hip/knee flexion-extension) and four unilateral voluntary tasks (hip/knee
               flexion/extension and ankle dorsiflexion/plantar flexion) were assessed on both sides. All voluntary tasks
               were cued by two 5-s tones with a brief pause (less than 1 s) between them. Participants were asked to start
               the first task at the tone and not to start the second task until they heard the second tone. A customised
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