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Zhao et al. Microbiome Res Rep. 2025;4:28  https://dx.doi.org/10.20517/mrr.2025.12  Page 7 of 13

               and related signaling pathways, which may lead to novel targeted strategies for early diagnosis and
               treatment of liver fibrosis.

               Causes of contradictory changes in BSH
               The inconsistent findings regarding BSH activity in MASLD may be attributed to several factors. First,
               clinical and animal studies differ in sample sources, detection methods, and disease modeling approaches.
               Second, the heterogeneity of MASLD itself may lead to dynamic changes in BSH activity among different
               populations. Third, BSH-expressing bacteria may exhibit strain-specific functional differences; for example,
                                                                                       [8]
               Lactobacillus and Bacteroides strains may behave differently in the context of MASLD . Song et al. reported
               that while atherosclerotic patients exhibited reduced total BSH abundance in the gut microbiota, the relative
               abundance of high-activity BSH subtypes was significantly increased, whereas low-activity subtypes were
               decreased . Lastly, structural variations and substrate specificity among microbial BSH enzymes may
                       [16]
               produce divergent effects on BA metabolism (i.e., the relative composition and absolute concentration of
               both conBAs and unconBAs). For example, several studies have reported an increase in pro-inflammatory
               DCA and a decrease in hepatoprotective UDCA in MASLD. To summarize, these contradictory findings
               underscore the complexity of microbial BSH’s role in MASLD development and the need for further
               mechanistic research to clarify its function and therapeutic potential.


               BIOLOGICAL MECHANISMS UNDERLYING BACTERIAL BSH-DRIVEN THERAPEUTIC
               INTERVENTIONS
               This section summarizes three main biological mechanisms through which targeting microbial BSH may
               contribute to the prevention and treatment of MASLD [Figure 1].

               Microbial BSH-mediated modulation of BA metabolism
               Regulating BA deconjugation through BSH represents a promising therapeutic approach for managing
               MASLD. Probiotics, prebiotics, and BA sequestrants have shown potential in modulating BA metabolism
               and thereby improving liver health in MASLD patients . Compared to conBAs, unconBAs are more
                                                                [39]
                                                                                            [40]
               hydrophobic and less soluble, facilitating their excretion or utilization by gut bacteria . This process
               triggers a feedback mechanism that stimulates the synthesis of primary BAs, thereby enhancing cholesterol
               utilization . Probiotics offer unique advantages in MASLD management, with BSH activity playing a
                        [41]
               crucial role in their colonization and growth in the gastrointestinal tract . Several well-characterized
                                                                                [42]
               BSH-active probiotic strains, primarily lactobacilli derived from both human and non-human origins,
               exhibit cholesterol-lowering effects and show promise for clinical application . Notably, Lactobacillus
                                                                                   [43]
               plantarum strains Lp91 and Lp21 demonstrate strong BSH activity, with a substrate preference for
               glycocholate over other amino acid conjugates . Moreover, colonization by BSH-positive bacteria is
                                                         [44]
               essential for BA hydrolysis and subsequent re-amidation . Genetic manipulation of these strains - either
                                                                [15]
               via BSH gene deletion or overexpression - can influence BA synthesis and conversion, offering therapeutic
               potential for modulating inflammation and liver diseases . BSH hydrolyzes conjugated BAs, thereby
                                                                  [14]
               reducing their toxicity to bacterial cell membranes, while the released taurine or glycine can be utilized as an
               energy source, conferring a nutritional advantage to the bacteria . Finally, diet interventions or bioactive
                                                                      [45]
               compounds may benefit MASLD through their influence on microbiota-BA interactions. For instance, Zhao
               et al. reported that administration of ilexsaponin A1 (IsA) significantly improved insulin resistance and
               hepatic steatosis in MASLD mice . This improvement was linked to increased BSH activity in the gut
                                            [28]
               microbiome, which promoted conjugated BA hydrolysis and reduced hepatic BA accumulation.

               Modulation of FXR and TGR5 signaling pathways to improve glucose and lipid metabolism
               FXR  and  TGR5  are  two  key  BA  receptors  involved  in  regulating  energy  expenditure,  reducing
               inflammation, and maintaining gut barrier integrity, making them attractive therapeutic targets for
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