Page 112 - Read Online
P. 112
Borrego-Ruiz et al. Microbiome Res Rep. 2025;4:20 https://dx.doi.org/10.20517/mrr.2024.78 Page 19 of 22
infancy precedes asthma at school age. Clin Exp Allergy. 2014;44:842-50. DOI PubMed
94. Stiemsma LT, Arrieta MC, Dimitriu PA, et al; Canadian Healthy Infant Longitudinal Development (CHILD) Study Investigators.
Shifts in Lachnospira and Clostridium sp. in the 3-month stool microbiome are associated with preschool age asthma. Clin Sci.
2016;130:2199-207. DOI PubMed
95. van Nimwegen FA, Penders J, Stobberingh EE, et al. Mode and place of delivery, gastrointestinal microbiota, and their influence on
asthma and atopy. J Allergy Clin Immunol. 2011;128:948-55.e1-3. DOI
96. Kerr CA, Grice DM, Tran CD, et al. Early life events influence whole-of-life metabolic health via gut microflora and gut
permeability. Crit Rev Microbiol. 2015;41:326-40. DOI
97. Puljiz Z, Kumric M, Vrdoljak J, et al. Obesity, gut microbiota, and metabolome: from pathophysiology to nutritional interventions.
Nutrients. 2023;15:2236. DOI PubMed PMC
98. Geng J, Ni Q, Sun W, Li L, Feng X. The links between gut microbiota and obesity and obesity related diseases. Biomed
Pharmacother. 2022;147:112678. DOI
99. Jian C, Carpén N, Helve O, de Vos WM, Korpela K, Salonen A. Early-life gut microbiota and its connection to metabolic health in
children: perspective on ecological drivers and need for quantitative approach. EBioMedicine. 2021;69:103475. DOI PubMed PMC
100. Wilkins AT, Reimer RA. Obesity, early life gut microbiota, and antibiotics. Microorganisms. 2021;9:413. DOI PubMed PMC
101. Cho KY. Association of gut microbiota with obesity in children and adolescents. Clin Exp Pediatr. 2023;66:148-54. DOI PubMed
PMC
102. Da Silva CC, Monteil MA, Davis EM. Overweight and obesity in children are associated with an abundance of firmicutes and
reduction of Bifidobacterium in their gastrointestinal microbiota. Child Obes. 2020;16:204-10. DOI PubMed
103. Scheepers LE, Penders J, Mbakwa CA, Thijs C, Mommers M, Arts IC. The intestinal microbiota composition and weight
development in children: the KOALA Birth Cohort Study. Int J Obes. 2015;39:16-25. DOI PubMed
104. Chang L, Neu J. Early factors leading to later obesity: interactions of the microbiome, epigenome, and nutrition. Curr Probl Pediatr
Adolesc Health Care. 2015;45:134-42. DOI PubMed
105. Manco M. Gut microbiota and developmental programming of the brain: from evidence in behavioral endophenotypes to novel
perspective in obesity. Front Cell Infect Microbiol. 2012;2:109. DOI PubMed PMC
106. Cox LM, Blaser MJ. Antibiotics in early life and obesity. Nat Rev Endocrinol. 2015;11:182-90. DOI PubMed PMC
107. Chen LW, Xu J, Soh SE, et al. Implication of gut microbiota in the association between infant antibiotic exposure and childhood
obesity and adiposity accumulation. Int J Obes. 2020;44:1508-20. DOI PubMed PMC
108. Zhang M, Differding MK, Benjamin-Neelon SE, Østbye T, Hoyo C, Mueller NT. Association of prenatal antibiotics with measures of
infant adiposity and the gut microbiome. Ann Clin Microbiol Antimicrob. 2019;18:18. DOI PubMed PMC
109. 2019;26:207-12. DOI PubMed
Li DK, Chen H, Ferber J, Odouli R. Infection and antibiotic use in infancy and risk of childhood obesity: a longitudinal birth cohort
study. Lancet Diabetes Endocrinol. 2017;5:18-25. DOI PubMed
110. Bakay M, Pandey R, Grant SFA, Hakonarson H. The genetic contribution to type 1 diabetes. Curr Diab Rep. 2019;19:116. DOI
PubMed
111. van Belle TL, Coppieters KT, von Herrath MG. Type 1 diabetes: etiology, immunology, and therapeutic strategies. Physiol Rev.
2011;91:79-118. DOI PubMed
112. Zheng P, Li Z, Zhou Z. Gut microbiome in type 1 diabetes: a comprehensive review. Diabetes Metab Res Rev. 2018;34:e3043. DOI
PubMed PMC
113. Zhou H, Sun L, Zhang S, Zhao X, Gang X, Wang G. Evaluating the causal role of gut microbiota in type 1 diabetes and its possible
pathogenic mechanisms. Front Endocrinol. 2020;11:125. DOI PubMed PMC
114. de Goffau MC, Fuentes S, van den Bogert B, et al. Aberrant gut microbiota composition at the onset of type 1 diabetes in young
children. Diabetologia. 2014;57:1569-77. DOI
115. Gülden E, Wong FS, Wen L. The gut microbiota and type 1 diabetes. Clin Immunol. 2015;159:143-53. DOI PubMed PMC
116. Gavin PG, Hamilton-Williams EE. The gut microbiota in type 1 diabetes: friend or foe? Curr Opin Endocrinol Diabetes Obes.
117. Kallionpää H, Laajala E, Öling V, et al; DIABIMMUNE Study Group. Standard of hygiene and immune adaptation in newborn
infants. Clin Immunol. 2014;155:136-47. DOI
118. Knip M, Siljander H. The role of the intestinal microbiota in type 1 diabetes mellitus. Nat Rev Endocrinol. 2016;12:154-67. DOI
PubMed
119. Kostic AD, Gevers D, Siljander H, et al; DIABIMMUNE Study Group. The dynamics of the human infant gut microbiome in
development and in progression toward type 1 diabetes. Cell Host Microbe. 2015;17:260-73. DOI PubMed PMC
120. Imhann F, Vich Vila A, Bonder MJ, et al. Interplay of host genetics and gut microbiota underlying the onset and clinical presentation
of inflammatory bowel disease. Gut. 2018;67:108-19. DOI PubMed PMC
121. Sarkar A, Yoo JY, Valeria Ozorio Dutra S, Morgan KH, Groer M. The association between early-life gut microbiota and long-term
health and diseases. J Clin Med. 2021;10:459. DOI PubMed PMC
122. Lindoso L, Mondal K, Venkateswaran S, et al. The effect of early-life environmental exposures on disease phenotype and clinical
course of Crohn’s disease in children. Am J Gastroenterol. 2018;113:1524-9. DOI
123. Örtqvist AK, Lundholm C, Halfvarson J, Ludvigsson JF, Almqvist C. Fetal and early life antibiotics exposure and very early onset
inflammatory bowel disease: a population-based study. Gut. 2019;68:218-25. DOI PubMed

