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Cantone                                                                                                                                                                          Reversal of X chromosome inactivation

           79.  Yoshida I, Nishita Y, Mohandas TK, Takagi N. Reactivation of an   factor, PRDM14, link X reactivation and stem cell reprogramming.
               inactive human X chromosome introduced into mouse embryonal   Mol Cell 2013;52:805-18.
               carcinoma cells by microcell fusion with persistent expression of   99.  Buganim Y, Faddah DA, Cheng AW, Itskovich E, Markoulaki S, Ganz
               XIST. Exp Cell Res 1997;230:208-19.               K, Klemm SL, van Oudenaarden A, Jaenisch R. Single-cell expression
           80.  Gurdon JB. Adult frogs derived from the nuclei of single somatic cells.   analyses during cellular reprogramming reveal an early stochastic and
               Dev Biol 1962;4:256-73.                           a late hierarchic phase. Cell 2012;150:1209-22.
           81.  Wilmut I, Schnieke AE, McWhir J, Kind AJ, Campbell KH. Viable   100.  Yamaji M, Seki Y, Kurimoto K, Yabuta Y, Yuasa M, Shigeta M,
               offspring derived from fetal and adult mammalian cells. Nature   Yamanaka K, Ohinata Y, Saitou M. Critical function of Prdm14
               1997;385:810-3.                                   for the establishment of the germ cell lineage in mice. Nat Genet
           82.  Egli D, Sandler VM, Shinohara ML, Cantor H, Eggan K.   2008;40:1016-22.
               Reprogramming after chromosome transfer into mouse blastomeres.   101.  Gillich A, Bao S, Surani MA. Reversion of mouse postimplantation
               Curr Biol 2009;19:1403-9.                         epiblast stem cells to a naive pluripotent state by modulation of
           83.  Egli D, Rosains J, Birkhoff G, Eggan K. Developmental reprogramming   signalling pathways. Methods Mol Biol 2013;1074:15-29.
               after chromosome transfer into mitotic mouse zygotes. Nature   102.  Ohhata T, Senner CE, Hemberger M, Wutz A. Lineage-specific
               2007;447:679-85.                                  function of the noncoding Tsix RNA for Xist repression and Xi
           84.  Egli D, Eggan K. Recipient cell nuclear factors are required for   reactivation in mice. Genes Dev 2011;25:1702-15.
               reprogramming by nuclear transfer. Development 2010;137:1953-63.  103.  Vallot C, Patrat C, Collier AJ, Huret C, Casanova M, Liyakat Ali TM,
           85.  Kang E, Wu G, Ma H, Li Y, Tippner-Hedges R, Tachibana M, Sparman M,   Tosolini M, Frydman N, Heard E, Rugg-Gunn PJ, Rougeulle C. XACT
               Wolf DP, Scholer HR, Mitalipov S. Nuclear reprogramming by interphase   noncoding RNA competes with XIST in the control of X chromosome
               cytoplasm of two-cell mouse embryos. Nature 2014;509:101-4.  activity during human early development. Cell Stem Cell 2017;20:102-
           86.  Egli D, Birkhoff G, Eggan K. Mediators of reprogramming:   11.
               transcription factors and transitions through mitosis. Nat Rev Mol Cell   104.  Navarro P, Avner P. When X-inactivation meets pluripotency: an
               Biol 2008;9:505-16.                               intimate rendezvous. FEBS Lett 2009;583:1721-7.
           87.  Rideout WM 3rd, Eggan K, Jaenisch R. Nuclear cloning and epigenetic   105.  Takagi N, Abe K. Detrimental effects of two active X chromosomes on
               reprogramming of the genome. Science 2001;293:1093-8.  early mouse development. Development 1990;109:189-201.
           88.  Inoue K, Kohda T, Lee J, Ogonuki N, Mochida K, Noguchi Y,   106.  Marahrens Y, Panning B, Dausman J, Strauss W, Jaenisch R.
               Tanemura K, Kaneko-Ishino T, Ishino F, Ogura A. Faithful expression   Xist-deficient mice are defective in dosage compensation but not
               of imprinted genes in cloned mice. Science 2002;295:297.  spermatogenesis. Genes Dev 1997;11:156-66.
           89.  Cantone I, Fisher AG. Epigenetic programming and reprogramming   107.  Vallot C, Ouimette JF, Makhlouf M, Feraud O, Pontis J, Come J,
               during development. Nat Struct Mol Biol 2013;20:282-9.  Martinat C, Bennaceur-Griscelli A, Lalande M, Rougeulle C. Erosion
           90.  Nolen LD, Gao S, Han Z, Mann MR, Gie Chung Y, Otte AP,   of X chromosome inactivation in human pluripotent cells initiates with
               Bartolomei MS, Latham KE. X chromosome reactivation and   XACT coating and depends on a specific heterochromatin landscape.
               regulation in cloned embryos. Dev Biol 2005;279:525-40.  Cell Stem Cell 2015; doi: 10.1016/j.stem.2015.03.016.
           91.  Bao S, Miyoshi N, Okamoto I, Jenuwein T, Heard E, Azim Surani   108.  Dvash T, Lavon N, Fan G. Variations of X chromosome inactivation
               M. Initiation of epigenetic reprogramming of the X chromosome in   occur in early passages of female human embryonic stem cells. PLoS
               somatic nuclei transplanted to a mouse oocyte. EMBO Rep 2005;6:748-  One 2010;5:e11330.
               54.                                            109.  Vallot C, Huret C, Lesecque Y, Resch A, Oudrhiri N, Bennaceur-
           92.  Inoue K, Kohda T, Sugimoto M, Sado T, Ogonuki N, Matoba S, Shiura   Griscelli A, Duret L, Rougeulle C. XACT, a long noncoding transcript
               H, Ikeda R, Mochida K, Fujii T, Sawai K, Otte AP, Tian XC, Yang X,   coating the active X chromosome in human pluripotent cells. Nat
               Ishino F, Abe K, Ogura A. Impeding Xist expression from the active   Genet 2013;45:239-41.
               X chromosome improves mouse somatic cell nuclear transfer. Science   110.  Diaz Perez SV, Kim R, Li Z, Marquez VE, Patel S, Plath K, Clark
               2010;330:496-9.                                   AT. Derivation of new human embryonic stem cell lines reveals rapid
           93.  Matoba S, Inoue K, Kohda T, Sugimoto M, Mizutani E, Ogonuki N,   epigenetic progression in vitro that can be prevented by chemical
               Nakamura T, Abe K, Nakano T, Ishino F, Ogura A. RNAi-mediated   modification of chromatin. Hum Mol Genet 2012;21:751-64.
               knockdown of Xist can rescue the impaired postimplantation   111.  Wutz A. Epigenetic alterations in human pluripotent stem cells: a tale
               development of cloned mouse embryos. Proc Natl Acad Sci U S A   of two cultures. Cell Stem Cell 2012;11:9-15.
               2011;108:20621-6.                              112.  Lengner CJ, Gimelbrant AA, Erwin JA, Cheng AW, Guenther MG,
           94.  Chadwick BP, Willard HF. Cell cycle-dependent localization of   Welstead GG, Alagappan R, Frampton GM, Xu P, Muffat J, Santagata
               macroH2A in chromatin of the inactive X chromosome. J Cell Biol   S, Powers D, Barrett CB, Young RA, Lee JT, Jaenisch R, Mitalipova M.
               2002;157:1113-23.                                 Derivation of pre-X inactivation human embryonic stem cells under
           95.  Hall LL, Byron M, Pageau G, Lawrence JB. AURKB-mediated effects   physiological oxygen concentrations. Cell 2010;141:872-83.
               on chromatin regulate binding versus release of XIST RNA to the   113.  Xie P, Ouyang Q, Leng L, Hu L, Cheng D, Tan Y, Lu G, Lin G. The
               inactive chromosome. J Cell Biol 2009;186:491-507.  dynamic changes of X chromosome inactivation during early culture
           96.  Takahashi K, Yamanaka S. Induction of pluripotent stem cells from   of human embryonic stem cells. Stem Cell Res 2016;17:84-92.
               mouse embryonic and adult fibroblast cultures by defined factors. Cell   114.  Gafni O, Weinberger L, Mansour AA, Manor YS, Chomsky E, Ben-
               2006;126:663-76.                                  Yosef D, Kalma Y, Viukov S, Maza I, Zviran A, Rais Y, Shipony Z,
           97.  Maherali N, Sridharan R, Xie W, Utikal J, Eminli S, Arnold K,   Mukamel Z, Krupalnik V, Zerbib M, Geula S, Caspi I, Schneir D,
               Stadtfeld M, Yachechko R, Tchieu J, Jaenisch R, Plath K, Hochedlinger   Shwartz T, Gilad S, Amann-Zalcenstein D, Benjamin S, Amit I, Tanay
               K. Directly reprogrammed fibroblasts show global epigenetic   A, Massarwa R, Novershtern N, Hanna JH. Derivation of novel human
               remodeling and widespread tissue contribution. Cell Stem Cell   ground state naive pluripotent stem cells. Nature 2013;504:282-6.
               2007;1:55-70.                                  115.  Ware CB, Nelson AM, Mecham B, Hesson J, Zhou W, Jonlin EC,
           98.  Payer B, Rosenberg M, Yamaji M, Yabuta Y, Koyanagi-Aoi M,   Jimenez-Caliani AJ, Deng X, Cavanaugh C, Cook S, Tesar PJ,
               Hayashi K, Yamanaka S, Saitou M, Lee JT. Tsix RNA and the germline   Okada J, Margaretha L, Sperber H, Choi M, Blau CA, Treuting PM,

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