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two randomized  phase III studies, the  Iressa Pan-Asia   advanced  NSCLC should have their  tumours assessed
            Study  (IPAS)  and  WJTOG3405,  the  use  of  gefitinib  as   for the presence of driver mutations.  Guidelines by the
                                                                                             [10]
            the first-line treatment for previously untreated metastatic   College of American Pathologists (CAP), the International
            adenocarcinoma  of the lung leads to longer progression-  Association for the Study of Lung Cancer (IASLC), and the
            free survival  (PFS) in patients with tumors positive  for   Association of Molecular Pathologists (AMP) recommend
            EGFR mutations,  compared  to platinum-based  doublet   analysis of either the primary tumour or of a metastasis for
            chemotherapy.  Similar  outcomes  have  been observed   EGFR and ALK mutations for all patients with tumours that
                       [5]
            for erlotinib  in  advanced  NSCLC patients  with  EGFR   exhibit features of an adenocarcinoma, regardless of their
            mutations.   These  findings  have  important  implications   clinical characteristics. [11]
                    [6]
            to lung cancer treatment  regimes in India, where EGFR
            mutations  have  been  shown to  occur  in  25-50% of  lung   The  most  important  requirements  for  molecular  testing
            cancer cases.  However, the purpose of mutational studies   modalities are that they should utilise clinically available
                      [7]
            in adenocarcinoma and squamous cell carcinoma  can be   specimens  (formalin-  or  paraffin-embedded  tissue)  and
            very different. Researchers have made important progress   that the turnaround time should be relatively  short.  The
            in  the  understanding  and  development  of treatments  for   instrument  should be semi-automated  and relatively
            adenocarcinomas, which are the most common type of lung   inexpensive.  The most commonly used modalities  are:
            cancer. Unfortunately, these treatments have been largely   (1) gene sequencing, the most comprehensive method for
            ineffective in treating lung squamous cell carcinomas. Lung   mutation testing; (2) next-generation sequencing, which uses
            squamous cell carcinomas frequently develop in the large   simultaneous evaluation of multiple genes or even whole
            airways in the centre of the lungs, while adenocarcinomas   genomes; (3) allele-specific testing, which analyzes DNA
            often arise at the edges of the lungs. Lung adenocarcinomas   for a predefined abnormality; (4) mass spectrometry, which
            sometimes affect non-smokers, while lung squamous cell   analyzes short fragments of DNA by their mass to charge
            carcinomas arise almost exclusively in smokers.    ratio and can detect fragments that have different molecular
                                                               weights than expected, a mutation; (5) fluorescence in situ
            Another example  of mutation-driven therapy is the   hybridisation (FISH), which is typically used to detect gene
            targeting  of the echinoderm  microtubule-associated   translocations,  amplifications,  and  other  rearrangements;
            protein  like  4-anaplastic  lymphoma  kinase  (EML4-  (6) immunohistochemistry (IHC), which is considered an
            ALK) rearrangement.  The ALK gene  encodes  anaplastic   alternative to FISH for determining ALK translocations; and
            lymphoma  kinase,  a  member  of  the  receptor  tyrosine   (7) multiplex genotype testing, which allows an entire panel
            kinase  (RTK) family. RTKs transmit  signals from the   of genotypes of interest to be queried at a single time from a
            cell  surface into the cell  through a process called  signal   single tissue sample instead of doing the tests sequentially.
            transduction. The EML-ALK fusion leads to uncontrolled   IHC is, however, not currently recommended for detecting
            cell proliferation. This mutation occurs in about 3-7% of   EGFR driver  mutations  since  positive  or negative  IHC
            unselected NSCLC.  In one study, NSCLC patients treated   results do not necessarily indicate the presence or absence,
                            [8]
            with crizotinib, a tyrosine kinase inhibitor targeting ALK,   respectively, of an EGFR mutation. In contrast, multiplex
            showed a response rate of 65%.  In cases where there was   genotype  testing  is  the  most  tissue-efficient  approach,
                                     [9]
            disease progression after treatment with crizotinib, ceritinib   particularly when dealing with small tumour samples.
            can  be  used. Ceritinib  is a  new  ALK inhibitor  that  has
            been recently approved based on its encouraging response   Mutations associated
            rate of 56% in patients whose cancer has progressed after   The  identification  of  oncogenic  activation  of  particular
            treatment with crizotinib.                         tyrosine kinases in some advanced NSCLC tumours, most
                                                               notably mutations in the EGFR  gene or rearrangements
            MOLECULAR TESTING                                  in of the ALK gene, has led to a paradigm shift and the
                                                               development of specific molecular treatments for patients.
            The most useful biomarkers for predicting the efficacy of
            targeted therapy in advanced NSCLC are somatic genome   EGFR mutations
            alterations  known as driver  mutations.  These  mutations   EGFR is a transmembrane protein with cytoplasmic kinase
            occur in cancer cells in genes encoding proteins that are   activity that transduces growth signals to the cell. Among
            critical to cell growth and survival. Driver mutations are   Asians, the incidence of EGFR mutation is much higher, up
            typically  transformative,  which means that they initiate   to 62%, and occurs more frequently among non-smokers.
            the evolution of a non-cancerous cell to a cancerous one.   In advanced NSCLC, the presence of an EGFR mutation
            In addition, driver mutations  often impart an oncogene   confers a favourable prognosis and is strongly indicative
            addiction  trait  to the transformed  cell.  This means that   of sensitivity to EGFR tyrosine kinase inhibitors such as
            the mutated  protein enables the cancer cell  to receive   erlotinib, gefitinib, and afatinib.
            survival signals from the driver mutations. Hence, driver
            mutations  are good biomarkers for selecting  patients   Nevertheless, it has been observed that most of the patients
            for targeted therapies.  Whenever feasible, patients with   who initially respond to an EGFR tyrosine kinase inhibitor


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