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Page 2 of 10                   Dong et al. Neuroimmunol Neuroinflammation 2018;5:5  I  http://dx.doi.org/10.20517/2347-8659.2017.47


               discovery of tdp43 mutation. In 2008, one observational study in France showed that 4% of familial ALS
                                         [2]
               patients had a tdp43 mutation . It was also found in sporadic ALS patients, which bolstered knowledge of
                                              [2]
               the pathological mechanism of ALS . The abnormal intracellular ubiquitin inclusion was confirmed to be
                                           [3,5]
               the cause of neuronal cell death . Therefore, the highly ubiquitinated phosphorylated TDP-43 protein is
               closely related to the development of ALS. This review illustrates the development of TDP-43 in ALS and its
               underlying mechanism.


               NORMAL TDP-43 AND ITS FUNCTION
               Normal TDP-43 is a protein with a length of 414 amino acids. It contains 2 RNA identity motifs (RRM1 and
                                                                                          [7]
                                                [6,7]
               RRM2, respectively) at the N terminal  and hydrophobic sequence in the C-terminus . The presence of
               the RRMs is a distinguishing feature of heterogeneous nuclear ribonucleoprotein proteins (hnRNP) and,
               in general, these regions are known to mediate RNA recognition as well as protein-protein interactions. The
                                                                                        [8]
               first RRM (RRM-1) is necessary and sufficient to bind specific RNA or DNA sequences . TDP-43 is encoded
               by tardbp which mainly distributed in the nucleus. Normal TDP-43 does not form inclusion bodies and
               is mainly involved in nuclear RNA transcription, mRNA precursor shear and mRNA stability regulation.
               Recruitment of full-length TDP-43 into cytoplasmic deposition formed inclusion bodies. Next, TDP-43
               combines with RNA/DNA and regulates RNA metabolism at multiple levels, including transcription, RNA
               splicing, and mRNA stability. In TDP-43 knockout HeLa cells and HEK293 cell cultures, tdp43 can regulate
               add2 gene expression by increasing Add2 mRNA stability, which is closely related to synaptic aggregation,
                                           [7,9]
               synaptic remodeling and stability . UTRs at the 3’ terminal of TDP-43 protein is a specific mRNAs that is
               associated with its distribution and aggregation in cells. TDP-43 takes charge of bidirectional transcription
               between the nucleus and cytoplasm. Its solubility and localization are closely related to its nuclear
                                                                           [8]
               localization signal. In addition, it also affects the function of the protein .
               By monitoring the levels of TDP-43 oligomers in vitro, TDP-43 has been found to communicate through the
                                                                 [10]
               axon in the cell by synaptic and microencapsulated uptake . With the help of nuclear magnetic resonance,
               simulation and microscopy, a sub-region has been found cooperatively but transiently to be folded into an
                                                             [11]
               a-Helical form that mediates TDP-43 phase separation . It has also been illustrated that the low-complexity
               of TDP-43 in liquid-liquid and phase-separated in vitro granules demonstrates ALS-associated variants
                                                        [11]
               that disrupts interactions within the granules . It is stabilized by extending its helices-structure and
                                                  [11]
               promotes binding between the molecules . Stable helical conformation was adopted by residues Pro320-
               Leu340 in an isolated peptide of Met311-Gln360, while it is indeed lacking of any stable secondary structure.
               An observation at the glycine rich region of C-terminal domain is relatively conservative and related to
                                                       [12]
               the concentration and separation of molecules . The concentration of TDP-43 molecules depends on its
                                                                  [11]
               a-Helical structure of the protein C-terminal fractures (CTF) .
               TDP-43 belongs to the family of the hnRNPs and is highly conserved among metazoans in both sequence
                          [12]
               and function . In human cells, overexpression of TDP-43 decreases exon 9 recognition and specifically
                                       [13]
               causes exon skipping in vitro .
               In relation to its function, TDP-43 has a variety of diverse roles including gene transcription, RNA
                                                                        [14]
               splicing, RNA shuttling and translation, and microRNA biogenesis . TDP-43 regulates various processes
               of transcription through RNA and DNA binding. Moreover, recent reports have shown that the protein
                                                       [15]
               interacts with the 3-UTRs of specific mRNAs . In a previous study, the depletion of TDP-43 through
               RNA interference removes splicing inhibition caused by unfavorable (UG)mU(n) sequences, indicating that
                                                          [15]
               TDP-43 exerts a potent inhibitory effect in vivo . More recently, new evidence that TDP-43 protein
               continuously shuttles between the nucleus and cytoplasm in a transcription-dependent manner has been
                       [16]
               reported . The functional TDP-43 plays a dominant role in exon 9 splicing regulatory elements and
               shows that TDP-43 related splice site has determined the evolution of positive splicing regulatory elements
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