Page 69 - Read Online
P. 69

Ponsero et al. Microbiome Res Rep 2023;2:27  https://dx.doi.org/10.20517/mrr.2023.26  Page 21 of 21

               25.      Zhang Q, Pell J, Canino-Koning R, Howe AC, Brown CT. These are not the k-mers you are looking for: efficient online k-mer
                   counting using a probabilistic data structure. PLoS One 2014;9:e101271.  DOI  PubMed  PMC
               26.      Lu YY, Tang K, Ren J, Fuhrman JA, Waterman MS, Sun F. CAFE: aCcelerated Alignment-FrEe sequence analysis. Nucleic Acids Res
                   2017;45:W554-9.  DOI  PubMed  PMC
               27.      Thomas AM, Segata N. Multiple levels of the unknown in microbiome research. BMC Biol 2019;17:48.  DOI  PubMed  PMC
               28.      Chu J, Mohamadi H, Erhan E, et al. Mismatch-tolerant, alignment-free sequence classification using multiple spaced seeds and
                   multiindex Bloom filters. Proc Natl Acad Sci U S A 2020;117:16961-8.  DOI  PubMed  PMC
               29.      Kazemi P, Wong J, Nikolić V, Mohamadi H, Warren RL, Birol I. ntHash2: recursive spaced seed hashing for nucleotide sequences.
                   Bioinformatics 2022;38:4812-3.  DOI  PubMed  PMC
               30.      Wang Y, Chen Q, Deng C, Zheng Y, Sun F. KmerGO: A tool to identify group-specific sequences with k-mers. Front Microbiol
                   2020;11:2067.  DOI  PubMed  PMC
   64   65   66   67   68   69   70   71   72   73   74