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Page 10 of 16                                             Weidner et al. J Transl Genet Genom 2019;3:2. I  https://doi.org/10.20517/jtgg.2018.30

               in members of the miR-34/449 family in asthmatic compared to healthy subjects, and miR-34/449 was found
               to regulate epithelial cell differentiation in vitro [107] .


               The asthma-chronic obstructive pulmonary disease overlap syndrome
               The asthma-chronic obstructive pulmonary disease (COPD) overlap syndrome (ACOS) is a relatively new
               definition and has clinical features of both asthma and COPD. It is likely that for ACOS, as for asthma and
               COPD, a range of different underlying mechanisms will be identified.

               Thus far, only one study has investigated the miRNA expression pattern in ACOS. Both miR-145 and miR-
               338 were increased in serum and sputum supernatant from the disease compared to healthy subjects. They
               could not find any differences between the expression of miRNA-145 and miRNA-338 in ACOS patients
               compared to asthma or COPD patients. The authors considered this finding as a confirmation that ACOS
               presents some overlapping characteristics between both diseases [108] .

               Asthma phenotype not defined
               CD4+ T cells from asthmatics demonstrated a negative correlation between miR-145 and runt-related
               transcription factor 3 (RUNX3) mRNA. Using miR-145 mimics and inhibitors the study revealed that miR-
               145 functions as a regulator of Th1/Th2 balance by targeting RUNX3 [109] . Increased expression of miR-323-
               3p in peripheral blood mononuclear cells from patients with asthma was associated with IL-22 production
               in T cells. miR-323-3p was found to act in a negative feedback loop to control the production of IL-22 in
               IL-22/IL-17 producing T cells and thereby affecting T cell responses in asthma [110] . Network analysis was
               used to identify a novel asthma-associated gene. The top ranked predicted target of the highly down-
               regulated miRNA-203 in asthmatic cells was the aquaporin 4 (AQP4) gene. Its expression was confirmed
               to be significantly higher in bronchial epithelial cells from patients with asthma. Up-regulation of AQP4
               in the bronchial epithelial cells of patients with asthma may represent a mechanism, by which the lung is
               attempting to clear excessive fluid [111] .


               FUTURE PERSPECTIVES
               As miRNAs are differentially expressed in various cells and time-points, there is much interest to use them
               in the clinic as biomarkers for asthma. Indeed, various studies have used mouse models and human subjects
               to explore the possibility of miRNA biomarkers in asthma [Table 1]. miRNAs are especially well suited for
               the biomarker role as they have been shown to be extremely resistant to different conditions (such as pH,
               heat, and freeze-thaw), likely due to their protection by various RNA binding proteins and/or the inclusion
               into vesicles [112-114] . Furthermore, miRNAs have been found in virtually every tissue and bodily fluid
               examined, meaning that they can be collected using both invasive and non-invasive methods. To date, a few
               therapies using miRNA agonists are in clinical trials, mostly for the treatment of cancers [115-119] . As miRNAs
               become bigger players in the asthma field, specific signatures and biomarkers to better define the disease
               may lead to work to develop more directed therapies for future generations.


               The current research direction in the asthma field in relation to miRNAs appears to be in the form of data
               generation and a search for biomarkers. Although this generation of data is critical for advancement in the
               field, there must be subsequent steps taken to validate these findings. Algorithms and machine learning
               are an excellent second step to understand if there is a relationship between asthma and the miRNA(s)
               in question, but one must take care to ensure that subject samples are utilized as well. It does no good for
               a perfect relationship, as predicted by modeling, if that cannot be replicated in vivo. Several open access
               programs are now helping researchers to better predict the targets of their miRNA of interest or the
               pathways that they may be affecting [85,120-123] . Unfortunately, a combination of programs must often be used in
               order to find potential miRNA-mRNA interactions, making it tedious and often unrewarding work during
               the validation phase. Furthermore, miRNAs can bind a several different targets and several miRNAs can
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