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Page 4 of 11                          Fonseka et al. J Cancer Metastasis Treat 2020;6:7  I  http://dx.doi.org/10.20517/2394-4722.2019.024
                        TM
               (Invitrogen ) at 20 V for 7 min. The membrane was incubated with blocking solution containing 5% (w/v)
               skim milk in Tris-buffered saline with 0.05% Tween 20 (TTBS) [100 mM Tris-HCl pH 7.5, 150 mM NaCl
               and 0.05% (v/v) Tween 20] for 45 min. The membrane was washed three times with TTBS (10 min each)
               and probed with the relevant primary antibody overnight at 4 °C. The membrane was again washed with
               TTBS over 30 min. Subsequently, the blot was probed with appropriate IRDye (LI-COR®) or peroxidase
               (Sigma-Aldrich®) conjugated secondary antibody for 1 h at room temperature. The blot was then washed
               three times with TTBS over 30 min. For the visualisation of the protein bands probed with IRDye (LI-COR®),
               ODYSSEY CLx (LI-COR®) machine was used.


               Cell death assay
                          3
               Cells (5 × 10  per well) were seeded in a 24-well plate in 500 µL DMEM medium and allowed to adhere
               for 48 h at 37 °C in the presence of 5% CO . Cells were then treated with or without doxorubicin (1 µM)
                                                     2
               and incubated for 48 h. For combinational treatment studies, curcumin (10 µM) or silibinin (100 µM)
               treatment was performed 24 h before the addition of doxorubicin (pre-treatment) as well as on the same
               day of doxorubicin treatment (combinational). After 48 h of cancer therapeutic drug treatment, cells were
               scraped and resuspended. Supernatant (300 µL) was then transferred in to a 96-well plate and spun at
               300 g for 5 min before discarding the supernatant. The remaining pellet was then resuspended with 200
               µL of propidium iodide (PI) buffer [0.1% (w/v) TritonX 100 and 50 µg/mL Propidium iodide (Sigma Life
                                                                    4
               Science®] and was incubated overnight at 4 °C. For this, 2 × 10  cells were used in the analysis, Results from
               fluorescence activated cell sorting CANTO II (BD Biosciences) were then analysed using FlowJo (TreeStar).

               Establishment of tumour xenografts
                                  6
               SK-N-BE2 cells (5 × 10 ) were subcutaneously injected to athymic Balb/c nude female mice (8 weeks old). The
               cells were suspended in Matrigel before the injections. After formation of tumours, the mice were injected
               intraperitoneally (i.p.) with dimethyl sulfoxide (DMSO) (control), curcumin (40 mg/kg), doxorubicin (5 mg/
               kg) and combinational treatment of doxorubicin and curcumin three times a week. Tumour size and the
                                                                                                     2
               weight of the mice were measured daily. The tumour volume was calculated according to the formula ½(W  × L).
               According to the Australian code of practice for the care and use of animals for scientific purposes and La Trobe
                                                                                                         3
               Ethics Committee guidelines (AEC 14-15), mice were sacrificed when the tumour size reached 1500 mm .
               Statistical analysis
               Statistical significance of experiments was analysed by student t-test and P values less than 0.05 were
               considered to be statistically significant. CI (Combination index) was calculated using Chou-Talalay
                      [41]
               method . A violin plot was generated using MATLAB and the P value of the violin plot was also
                                      [42]
               calculated using MATLAB .

               RESULTS
               Neuroblastoma cells exhibit mesenchymal signature
               Prior to commencement of the experiments, publicly available RNA-Seq data for neuroblastoma tissues
               and cells were queried for the expression of EMT genes to examine the hypothesis of whether the
               neuroblastoma cells are mesenchymal. To validate the expression of epithelial and mesenchymal genes,
               publicly available RNA-Seq data for neuroblastoma cell lines and tissues were examined. In total, 315 genes
                                                                    [43]
               implicated in EMT were retrieved from the public literature  and the expression profile of these genes
               were plotted in a panel of neuroblastoma cell lines and tissues [Figure 1]. Interestingly, agreeing with our
               hypothesis, neuroblastoma cell lines (n = 8) and tissues (n = 157) exhibited a high mesenchymal and low
               epithelial gene expression. These results suggest that neuroblastoma cells are mesenchymal and hence could
               contribute to the aggressive phenotype.
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