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Broadwin et al. Vessel Plus 2023;7:25                                      Vessel Plus
               DOI: 10.20517/2574-1209.2023.103



               Original Article                                                              Open Access



               Extracellular vesicle treatment partially reverts

               epigenetic alterations in chronically ischemic
               porcine myocardium


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               Mark Broadwin 1  , Ghazal Aghagoli , Sharif A. Sabe , Dwight D. Harris , Joselynn Wallace , Jordan
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               Lawson , Ashok Ragayendran , Alexey V. Fedulov , Frank W. Sellke 1
               1
                Division of Cardiothoracic Surgery, Department of Surgery, Cardiovascular Research Center, Rhode Island Hospital, Alpert
               Medical School of Brown University, Rhode Island Hospital, Providence, RI 02909, USA.
               2
                Center for Computation and Visualization, Brown University, Providence, RI 02912, USA.
               3
                Center for Computational Biology of Human Disease, Brown University, Providence, RI 02912, USA.
               4
                Division of Surgical Research, Department of Surgery, Rhode Island Hospital, Alpert Medical School of Brown University, Rhode
               Island Hospital, Providence, RI 02909, USA.
               Correspondence to: Prof. Frank W. Sellke, MD, Division of Cardiothoracic Surgery, Department of Surgery, Cardiovascular
               Research Center, Rhode Island Hospital, Alpert Medical School of Brown University, 2 Dudley Street, MOC 360, Providence, RI
               02905, USA. E-mail: fsellke@lifespan.org
               How to cite this article: Broadwin M, Aghagoli G, Sabe SA, Harris DD, Wallace J, Lawson J, Ragayendran A, Fedulov AV, Sellke
               FW. Extracellular vesicle treatment partially reverts epigenetic alterations in chronically ischemic porcine myocardium. Vessel
               Plus 2023;7:25. https://dx.doi.org/10.20517/2574-1209.2023.103
               Received: 8 Aug 2023  First Decision: 26 Sep 2023  Revised: 12 Oct 2023  Accepted: 27 Oct 2023  Published: 3 Nov 2023
               Academic Editor: Narasimham L. Parinandi  Copy Editor: Fangling Lan  Production Editor: Fangling Lan

               Abstract
               Introduction: Research has shown epigenetic change via alternation of the methylation profile of human skeletal
               muscle DNA after Cardio-Pulmonary Bypass (CPB). In this study, we investigated the change in epigenome-wide
               DNA methylation profiles of porcine myocardium after ischemic insult in the setting of treatment with extracellular
               vesicle (EV) therapy in normal vs. high-fat diet (HFD) pigs.

               Methods: Four groups of three pigs underwent ameroid constrictor placement to the left circumflex artery (LCx)
               and were assigned to the following groups: (1) normal diet saline injection; (2) normal diet EV injection; (3) HFD
               saline injection; and (4) HFD EV injection. DNA methylation was profiled via reduced-representation bisulfite
               sequencing (RRBS) and compared using a custom bioinformatic pipeline.
               Results: After initial analysis, 441 loci had a nominal P value < 0.05 when examining the effect of ischemia vs.
               normal heart tissue on a normal diet in the absence of treatment. 426 loci at P value threshold < 0.05 were
               identified when comparing the ischemic vs. normal tissue from high-fat diet animals. When examining the effect of




                           © The Author(s) 2023. Open Access This article is licensed under a Creative Commons Attribution 4.0
                           International License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, sharing,
                           adaptation, distribution and reproduction in any medium or format, for any purpose, even commercially, as
               long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and
               indicate if changes were made.

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