Page 112 - Read Online

Page 32 Jaswant et al. One Health Implement Res 2024;4:15-37 https://dx.doi.org/10.20517/ohir.2023.61

WHO-TRS-1012. [Last accessed on 28 May 2024].
27. Nguyen AKT, Vu AH, Nguyen TT, et al. Risk factors and protective immunity against rabies in unvaccinated butchers working at
dog slaughterhouses in Northern Vietnam. Am J Trop Med Hyg 2021;105:788-93. DOI PubMed PMC
28. Minghui R, Stone M, Semedo MH, Nel L. New global strategic plan to eliminate dog-mediated rabies by 2030. Lancet Glob Health
2018;6:e828-9. DOI PubMed
29. Cutts FT, Waldman RJ, Zoffman HM. Surveillance for the expanded programme on immunization. Bull World Health Organ
1993;71:633-9. PubMed PMC
30. Thacker SB, Berkelman RL. Public health surveillance in the United States. Epidemiol Rev 1988;10:164-90. DOI PubMed
31. Wallace RM, Reses H, Franka R, et al. Establishment of a high canine rabies burden in Haiti through the implementation of a novel
surveillance program [corrected]. PLoS Negl Trop Dis 2015;9:e0004245. DOI PubMed PMC
32. Talbi C, Lemey P, Suchard MA, et al. Phylodynamics and human-mediated dispersal of a zoonotic virus. PLoS Pathog
2010;6:e1001166. DOI PubMed PMC
33. Bedford T, Cobey S, Beerli P, Pascual M. Global migration dynamics underlie evolution and persistence of human influenza A
(H3N2). PLoS Pathog 2010;6:e1000918. DOI PubMed PMC
34. Lemey P, Rambaut A, Bedford T, et al. Unifying viral genetics and human transportation data to predict the global transmission
dynamics of human influenza H3N2. PLoS Pathog 2014;10:e1003932. DOI PubMed PMC
35. Quick J, Loman NJ, Duraffour S, et al. Real-time, portable genome sequencing for Ebola surveillance. Nature 2016;530:228-32. DOI
PubMed PMC
36. Quick J, Grubaugh ND, Pullan ST, et al. Multiplex PCR method for MinION and Illumina sequencing of Zika and other virus
genomes directly from clinical samples. Nat Protoc 2017;12:1261-76. DOI PubMed PMC
37. Giovanetti M, Pinotti F, Zanluca C, et al. Genomic epidemiology unveils the dynamics and spatial corridor behind the Yellow Fever
virus outbreak in Southern Brazil. Sci Adv 2023;9:eadg9204. DOI PubMed PMC
38. Faria NR, Kraemer MUG, Hill SC, et al. Genomic and epidemiological monitoring of yellow fever virus transmission potential.
Science 2018;361:894-9. DOI PubMed PMC
39. Roychoudhury P, Sereewit J, Xie H, et al. Genomic analysis of early monkeypox virus outbreak strains, Washington, USA. Emerg
Infect Dis 2023;29:644-6. DOI PubMed PMC
40. Kugelman JR, Johnston SC, Mulembakani PM, et al. Genomic variability of monkeypox virus among humans, Democratic Republic
of the Congo. Emerg Infect Dis 2014;20:232-9. DOI PubMed PMC
41. Forni D, Cagliani R, Molteni C, Clerici M, Sironi M. Monkeypox virus: the changing facets of a zoonotic pathogen. Infect Genet Evol
2022;105:105372. DOI PubMed PMC
42. Li Y, Hou J, Sun Z, et al. Monkeypox virus 2022, gene heterogeneity and protein polymorphism. Signal Transduct Target Ther
2023;8:278. DOI PubMed PMC
43. Faria NR, Mellan TA, Whittaker C, et al. Genomics and epidemiology of the P.1 SARS-CoV-2 lineage in Manaus, Brazil. Science
2021;372:815-21. DOI PubMed PMC
44. Trewby H, Nadin-Davis SA, Real LA, Biek R. Processes underlying rabies virus incursions across US-Canada border as revealed by
whole-genome phylogeography. Emerg Infect Dis 2017;23:1454-61. DOI PubMed PMC
45. Layan M, Dellicour S, Baele G, Cauchemez S, Bourhy H. Mathematical modelling and phylodynamics for the study of dog rabies
dynamics and control: a scoping review. PLoS Negl Trop Dis 2021;15:e0009449. DOI PubMed PMC
46. Brunker K, Jaswant G, Thumbi SM, et al. Rapid in-country sequencing of whole virus genomes to inform rabies elimination
programmes. Wellcome Open Res 2020;5:3. DOI PubMed PMC
47. Okeke IN, Ihekweazu C. The importance of molecular diagnostics for infectious diseases in low-resource settings. Nat Rev Microbiol
2021;19:547-8. DOI PubMed PMC
48. Page MJ, Moher D, Bossuyt PM, et al. PRISMA 2020 explanation and elaboration: updated guidance and exemplars for reporting
systematic reviews. BMJ 2021;372:n160. DOI PubMed PMC
49. The R project for statistical computing. Available from: https://www.r-project.org/. [Last accessed on 28 May 2024].
50. Ouzzani M, Hammady H, Fedorowicz Z, Elmagarmid A. Rayyan-a web and mobile app for systematic reviews. Syst Rev 2016;5:210.
DOI PubMed PMC
51. Talbi C, Holmes EC, de Benedictis P, et al. Evolutionary history and dynamics of dog rabies virus in western and central Africa. J
Gen Virol 2009;90:783-91. DOI PubMed
52. Troupin C, Dacheux L, Tanguy M, et al. Large-scale phylogenomic analysis reveals the complex evolutionary history of rabies virus
in multiple carnivore hosts. PLoS Pathog 2016;12:e1006041. DOI PubMed PMC
53. Hayman DT, Fooks AR, Marston DA, Garcia-R JC. The global phylogeography of lyssaviruses - challenging the ‘Out of Africa’
hypothesis. PLoS Negl Trop Dis 2016;10:e0005266. DOI PubMed PMC
54. Bourhy H, Reynes JM, Dunham EJ, et al. The origin and phylogeography of dog rabies virus. J Gen Virol 2008;89:2673-81. DOI
PubMed PMC
55. Oem JK, Kim SH, Kim YH, Lee MH, Lee KK. Reemergence of rabies in the southern Han river region, Korea. J Wildl Dis
2014;50:681-8. DOI PubMed
56. Velasco-Villa A, Mauldin MR, Shi M, et al. The history of rabies in the Western Hemisphere. Antiviral Res 2017;146:221-32. DOI
PubMed PMC