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Prasath. Neuroimmunol Neuroinflammation 2018;5:1                   Neuroimmunology
               DOI: 10.20517/2347-8659.2017.68                              and Neuroinflammation




               Letter to Editor                                                              Open Access


               Deep learning based computer-aided diagnosis
               for neuroimaging data: focused review and future
               potential


               V. B. Surya Prasath 1,2,3

               1 Computational Imaging and VisAnalysis (CIVA) Lab, Department of Computer Science, University of Missouri-Columbia,
               Columbia, MO 65211, USA.
               2 Division of Biomedical Informatics, Cincinnati Children's Hospital Medical Center (CCHMC), Cincinnati, OH 45229, USA.
               3 Department of Biomedical Informatics, College of Medicine, University of Cincinnati, OH 45267, USA.

               Correspondence to: Dr. V. B. Surya Prasath, Computational Imaging and VisAnalysis (CIVA) Lab, Department of Computer
               Science, University of Missouri-Columbia, Columbia, MO 65211, USA. E-mail: prasaths@missouri.edu

               How to cite this article: Prasath VBS. Deep learning based computer-aided diagnosis for neuroimaging data: focused review
               and future potential. Neuroimmunol Neuroinflammation 2018;5:1. http://dx.doi.org/10.20517/2347-8659.2017.68

               Received: 25 Dec 2017    Accepted: 28 Dec 2017    Published: 12 Jan 2018
               Science Editor: Athanassios P. Kyritsis    Copy Editor: Lu Liu    Production Editor: Huan-Liang Wu


               Automatic image analysis techniques applied to neuroimaging data in general, and magnetic resonance
               imaging (MRI), and functional MRI (fMRI) in particular, have proven to be effective computer-aided
               diagnosis (CAD) tools in neuroscience [1-4] . Recently, the advancements in machine learning techniques
               combined with the wide availability of computational power have proven to be efficient in solving
               previously difficult problems in analyzing neuroimaging data. At the forefront of these advancements is the
               usage of deep (artificial) neural network architectures that led robust learning based techniques to attack
                                                                                      [5-8]
               challenging problems such as segmentation and classification in neuroimaging data .
               Many of the impressive results obtained in CAD using deep learning (DL) techniques utilize mainly
               image datasets. DL networks typically require annotations of several images for employing supervised
               learning techniques and are one of the roadblocks in employing these state of the art networks in various
               classification tasks in MRI/fMRI. However, unsupervised learning techniques within the DL paradigm are
               now being employed in natural image classification with a lot of success and we believe the adaptability of
               these to the neuroimaging data are required to attack challenging neuroimage analysis problems.


                                                                                                     [9]
               A stacked denoising auto encoders approach that is an unsupervised learning technique was used  for
               brain tumor segmentation in MRI imagery. The experimental results showed that using this particular
               approach is as good as using supervised learning based DL techniques that require accurate image-based
               annotations. This indicates that we can use different unsupervised learning in DL networks variants for

                           © The Author(s) 2018. Open Access This article is licensed under a Creative Commons Attribution 4.0
                           International License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use,
                sharing, adaptation, distribution and reproduction in any medium or format, for any purpose, even commercially, as long
                as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license,
                and indicate if changes were made.


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