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Microbiome Research Reports

C O NT E NT S

Topic: Metabolomics and Proteomic Approaches Applied to Microbiomes

1 RapidAIM 2.0: a high-throughput assay to study functional response of human gut microbiome
to xenobiotics
Leyuan Li, Janice Mayne, Adrian Beltran, Xu Zhang, Zhibin Ning, Daniel Figeys
Microbiome Res Rep 2024;3:26 http://dx.doi.org/10.20517/mrr.2023.57

2 Faecalibacterium prausnitzii A2-165 metabolizes host- and media-derived chemicals and
induces transcriptional changes in colonic epithelium in GuMI human gut
microphysiological system
Yu-Ja Huang, Caroline A. Lewis, Charles Wright, Kirsten Schneider, John Kemmitt, David L.
Trumper, David T. Breault, Omer Yilmaz, Linda G. Griffith, Jianbo Zhang
Microbiome Res Rep 2024;3:30 http://dx.doi.org/10.20517/mrr.2024.14

3 Assessing fecal metaproteomics workflow and small protein recovery using DDA and DIA
PASEF mass spectrometry
Angela Wang, Emily E F Fekete, Marybeth Creskey, Kai Cheng, Zhibin Ning, Annabelle Pfeifle,
Xuguang Li, Daniel Figeys, Xu Zhang
Microbiome Res Rep 2024;3:39 http://dx.doi.org/10.20517/mrr.2024.21

Microbiome Research Reports III