Page 48 - Read Online
P. 48

Alekseeva et al. Microbiome Res Rep 2023;2:10  https://dx.doi.org/10.20517/mrr.2023.06  Page 15 of 15

                   inflammatory factors. Front Immunol 2020;11:595877.  DOI  PubMed
               26.      Danilenko VN, Alekseeva MG, Koshenko Ta et al. Species-forming PFNA operon of bifidobacteria: modules of sensor proteins Pkb2
                   and FN3, structure and distribution among different species and strains of bifidobacteria in human intestinal microbiome. Russ J Genet
                   2022;58:1059-71.  DOI
               27.      Averina OV, Ermolenko EI, Ratushniy AY et al. Influence of probiotics on cytokine production in the in vitro and in vivo systems.
                   Med Immunol 2015;17:443-54.  DOI
               28.      Zakharevich NV, Averina OV, Klimina KM et al. Complete genome sequence of bifidobacterium longum GT15: identification and
                   characterization of unique and global regulatory genes. Microb Ecol 2015;70:819-34.  DOI  PubMed
               29.      Inoue H, Nojima H, Okayama H. High efficiency transformation of Escherichia coli with plasmids. Gene 1990;96:23-8.  DOI  PubMed
               30.      Mierendorf R, Yeager K, Novy R. The pET system: your choice for expression. Innovations. Available from: http://wolfson.huji.ac.il/
                   expression/rosetta.pdf [Last accessed on 7 Apr 2023].
               31.      Maniatis T. Molecular cloning. A laboratory manual; 1982.  DOI
               32.      Veselovsky VA, Dyachkova MS, Bespiatykh DA et al. The gene expression profile differs in growth phases of the bifidobacterium
                   longum culture. Microorganisms 2022;10:1683.  DOI  PubMed
               33.      Du Z, Su H, Wang W et al. The trRosetta server for fast and accurate protein structure prediction. Nat Protoc 2021;16:5634-51.  DOI
                   PubMed
               34.      Broughton SE, Hercus TR, Nero TL et al. Conformational changes in the GM-CSF receptor suggest a molecular mechanism for
                   affinity conversion and receptor signaling. Structure 2016;24:1271-81.  DOI  PubMed
               35.      Bork P, Doolittle RF. Proposed acquisition of an animal protein domain by bacteria. Proc Natl Acad Sci USA 1992;89:8990-4.  DOI
                   PubMed
               36.      Aravind L, Anantharaman V, Iyer LM. Evolutionary connections between bacterial and eukaryotic signaling systems: a genomic
                   perspective. Curr Opin Microbiol 2003;6:490-7.  DOI  PubMed
               37.      Ventura M, Turroni F, Zomer A et al. The Bifidobacterium dentium Bd1 genome sequence reflects its genetic adaptation to the human
                   oral cavity. PLoS Genet 2009;5:e1000785.  DOI  PubMed
   43   44   45   46   47   48   49   50   51   52   53